

Sanz G, Martínez-Aranda LM, Tesch PA, Fernandez-Gonzalo R, Lundberg TR (2019) Muscle2View, a CellProfiler pipeline for detection of the capillary-to-muscle fiber interface and high-content quantification of fiber type-specific histology.Mazzoleni V, Zimmermann‐Meisse G, Smirnova A, Tarassov I, Prévost G (2020) Staphylococcus aureus Panton‐Valentine Leukocidin triggers an alternative NETosis process targeting mitochondria.Microscopy Research & Technique. Epub ahead of print. Groiss S, Somvilla I, Daxböck C, Fuchs J, Lang-Olip I, Stiegler P, Leber B, Liegl-Atzwanger B, Brislinger D (2021) Quantification of increased MUC5AC expression in airway mucus of smoker using an automated image-based approach.Nanoparticles Formulation Improves the Antifibrogenic Effect of Quercetin on an Adenine-Induced Model of Chronic Kidney Disease. Sánchez-Jaramillo EA, Gasca-Lozano LE, Vera-Cruz JM, Hernández-Ortega LD, Gurrola-Díaz CM, Bastidas-Ramírez BE, Vargas-Guerrero B, Mena-Enríquez M, Martínez-Limón FJ, Salazar-Montes AM.European Journal of Endocrinology / European Federation of Endocrine Societies. Digital quantification of somatostatin receptor subtype 2a immunostaining: a validation study. Current Methods and Pipelines for Image-Based Quantitation of Nuclear Shape and Nuclear Envelope Abnormalities. Lihua Zhao, Alejandro Fonseca, Anis Meschichi, Adrien Sicard, Stefanie Rosa. Whole-mount smFISH allows combining RNA and protein quantification at cellular and subcellular resolution.Supplemental notes describing the pipelines.
#Cellprofiler cell painting names zip file#
Please note that each download link contains a compressed ZIP file with the following: Please remember to give CellProfiler the proper citation in your paper. If you used CellProfiler in a publication and would like to post your pipelines here, please contact us we would be happy to host them.
#Cellprofiler cell painting names update#
You can instead download the most current version of CellProfiler older pipelines should automatically update to the current version when loaded. Here, we provide links to pipelines used in some published studies, as well as the version of CellProfiler used to create them. CellProfiler enables reproducible research because a saved pipeline includes all the modules and settings.
